Master's Programme in Protein Science, 120 credits

Masterprogram i Protein Science, 120 hp

6MPRO

Teaching language

English

Campus

Linköping

Degree

Degree of Master of Science (120 credits) with a major in Chemical Biology

Pace of study

Full-time

Purpose

The Master’s programme in Protein Science aims to provide the students with the knowledge, skills and attitudes required for a professional in the field or for further postgraduate studies. The programme meets both national and international needs from universities, industry, and society in general. The training intends to provide an in-depth understanding of the chemical and biophysical properties of proteins and other biomolecules and the role these molecules play in primarily the biomedical field, but also for applications in biotechnology.

Students graduating from the Master's programme in Protein Science shall:

  • be well prepared for both postgraduate studies and for the national and international labour market.
  • be able to contribute to the sustainable development of society.
  • be prepared for advanced scientific communication with different target groups.

Aim

Disciplinary knowledge and reasoning

Graduates from the Master’s programme in Protein Science demonstrate knowledge and understanding in the field of protein science, including a broad knowledge of the area and considerable in-depth knowledge in certain parts of the area. The graduates are also acquainted with current research in the field.

The programme builds upon a Bachelor education, where fundamental knowledge in Chemistry, Chemical Biology or equivalent has been acquired. Entry requirements include at least 10 ECTS credits in Biochemistry.

A graduated student from the Master's program in Protein Science has in-depth knowledge in protein chemistry, proteomics, structural biology and pharmaceutical chemistry. This includes knowledge of

  • structural biological methods, including experimental methods for studying the structural-functional relationships of proteins and other biomolecules
  • important concepts and theories for interactions and reaction mechanisms of biomolecules
  • methods and strategies for global, quantitative, and comparative protein analysis
  • biomolecular processes important for protein misfolding diseases, cancer, viral diseases, and drug function.
  • pharmaceutical development based on both small molecules and proteins.

In addition, the graduate student from the program can plan, perform, and evaluate laboratory experiments in protein science, as well as use modern software for analysis of related data.

The Master's programme in Protein Science is conducted in close collaboration with strong research environments, which gives the student insight into current research issues in the molecular life sciences based on protein chemistry, structural biology, and proteomics. During the Master thesis work the student can work for a full year with a research group, a company or a public authority, getting very well acquainted with research findings within one of the areas. The graduated student is also able to design a scientific study and is skilled in critically reading relevant research literature.

Personal and professional skills and attributes

Students graduated from the Master's programme in Protein Science have achieved the individual and professional skills and attitudes required to be able to critically and systematically integrate knowledge and to analyze and evaluate complex issues even with limited information. The graduates can also take responsibility at work or during post graduate studies concerning work ethics, reliability, and respect for the expertise of other professionals. Students from the programme can make relevant judgements regarding scientific, social, and ethical aspects.

Interpersonal skills: Teamwork and communication

Students having graduated from the Master's programme in Protein Science can collaborate with other people. This requires the ability to actively participate in a team with designated roles, tasks and responsibilities. The graduates can also initiate, plan, lead and evaluate larger projects. Students graduated from the programme are skilled in written and oral communication. The students can present information, problems, and solutions in a structured way with relevant techniques, in English or in their native language, to different target groups.

Planning, execution, and presentation of research or development projects with respect to scientific and societal needs and requirements

Students graduated from the Master's programme in Protein Science shall have knowledge about the natural scientist and the role of natural science in society. The graduates also understand the social and economic conditions in the field and in the related research area. They can initiate, conduct, and present advanced development projects with established methods.

Content

The Master’s programme consists of advanced courses at the interface between chemistry and biology. The courses focus on proteins and other biomolecules, especially their chemical and biophysical properties, comprehensive methodology for structural and functional studies, and their importance in the field of biomedicine. Courses in structural biology, proteomics, molecular virology, pharmacology, and pharmaceutical chemistry are included. The programme ends with a thesis that can be performed at a university or a company. During the thesis work, deeper knowledge within a specific field of protein science is acquired, by independent experimental work and literature studies. The thesis may be a good introduction to further studies at postgraduate level.

The curriculum specifies which courses are given and when they are given, and during which semester the course is recommended to be taken. Each course is presented in a syllabus, where the course's objectives and content and the special prerequisites required to qualify for the course are described.

Teaching and working methods

The programme comprises four semesters of full-time studies and leads to a Master of Science (120 credits) in Chemical Biology. The teaching language is English. The programme is campus-based and the included courses are found in the curriculum. Normally the content of the courses is presented at lectures, laboratory work and seminars. Laboratory projects and other assignments are parts of some courses and will be reported orally and/or in writing. Participation at lectures and problem-solving classes is usually voluntarily while laboratory work and seminars are compulsory. 

The Master thesis is mainly performed during the second year and comprises 30, 45 or 60 högskolepoäng (equivalent to ECTS credits). This means that the student may choose a less extensive master thesis and combine this with further course studies in other related areas, or more in-depth courses in the same field.

In the curriculum, it is specified which courses are mandatory (m), elective (e) or voluntary (v). Also the notation m/e could be found, which means that one of a group of courses should be selected. Courses not included in the curriculum must be approved by the programme board after consultation with the study counselor. The courses should be relevant for the programme. 

Two alternative curricula are used, depending on the educational background of the student. They are presented as two profiles: 

  • "Internal" is for students with a Bachelor's degree in Chemical biology from Linköping University and other students with knowledge corresponding to the learning outcomes from TFKE37 Biological Measurements, TFTB55 Bioinformatics, TFKE75 Project course in Molecular Biology Techniques and NKED28 Protein Chemistry.
  • "External" is for students who meet the specific admission requirements to the programme, but who do not have knowledge corresponding to the learning outcomes from TFKE37, TFTB55, TFKE75 and NKED28.

Entry requirements

  • A bachelor's degree equivalent to a Swedish Kandidatexamen with a major in one of the following or equivalent subject areas: 
    - chemistry 
    - chemical biology
  • 10 ECTS credits passed in the field of biochemistry.
  • English corresponding to the level of English in Swedish upper secondary education (Engelska 6 or Engelska nivå 2). 
    Exemption from Swedish.

    Degree thesis

    The thesis work should be of scientifically high quality and be carried out in close connection with ongoing research in the main field of study. The thesis must be written and presented in English. If possible, the work should be presented orally at the mini-symposium arranged by the Division of Chemistry and all students are supposed to be present. In this case, the requirement of prior attendance at final thesis seminars is disregarded.

    To be qualified to conduct a degree project of 60 ECTS credits, the student must be admitted to the master’s programme and have completed at least 30 ECTS credits from courses within the programme, of which 24 ECTS credits must be at the advanced (graduate) level within the main field of study.

    To be qualified to conduct a degree project of 45 ECTS credits, the student must be admitted to the master’s programme and have completed at least 35 ECTS credits from courses within the programme, of which 24 ECTS credits must be at the advanced (graduate) level within the main field of study.

    To be qualified to conduct a degree project of 30 ECTS credits, the student must be admitted to the master’s programme and have completed at least 60 ECTS credits from courses within the programme, of which 30 ECTS credits must be at the advanced (graduate) level within the main field of study.

    Degree requirements

    The programme leads to a "Degree of Master of Science (120 credits) with a major in Chemical Biology", in Swedish "Naturvetenskaplig masterexamen med huvudområde Kemisk biologi".

    The requirements are the following:

    • a Bachelor's degree as specified in the entrance requirements.
    • passed the requirements for all compulsory courses.
    • course requirements for a total of 120 ECTS credits from courses from the curriculum of the programme (including thesis work).
    • courses on advancement level A (advanced) 90 ECTS credits including:
      • at least 30 ECTS credits courses from the main field of study Chemical Biology.
      • at least 30 ECTS credits Master's Thesis in the main field of study Chemical Biology.
    • a Master's thesis of at least 30 ECTS on advanced level presented and passed according to the degree regulations stipulated by the Faculty of Science and Engineering at Linköping University, or equivalent.

    Courses overlapping in content are not both allowed to be included in the degree. In the case courses partly overlap, part of a course could be included in the degree after decision from the programme board.

    Courses used for the Bachelor's degree can never be included in the Master's degree.  

    Degree in Swedish

    Naturvetenskaplig masterexamen med huvudområde Kemisk biologi

    Degree in English

    Degree of Master of Science (120 credits) with a major in Chemical Biology

    Common rules

    See also general regulations.

    Deviations from programme syllabus

    If special circumstances prevail, the vice-chancellor may in a special decision specify the preconditions for temporary deviations from this programme syllabus, and delegate the right to take such decisions.

    Semester 1 Autumn 2026

    Specialisation: External
    Course code Course name Credits Level Timetable module ECV
    Period 1
    TFKE37 Biological Measurements 6 G2F 2/3 C
    TFKE65 State of the Art in Molecular Life Science 6* A1N 4 C
    *The course is divided into several semesters and/or periods
    TFTB55 Bioinformatics 6 G2F 1 C
    Period 2
    NVFA09 Pharmacology 6 G2F 3 C
    TFKE65 State of the Art in Molecular Life Science 6* A1N 4 C
    *The course is divided into several semesters and/or periods
    NBIC60 Molecular Environmental Toxicology 6 G2F 2 E
    TAMS11 Probability and Statistics, First Course 6 G2F 4 E
    TVCB13 Stem Cell Engineering 6 A1N 1 E
    Specialisation: Internal
    Course code Course name Credits Level Timetable module ECV
    Period 1
    TFKE57 Proteomics 6 A1N 3 C
    TFKE65 State of the Art in Molecular Life Science 6* A1N 4 C
    *The course is divided into several semesters and/or periods
    TVMB26 Molecular Virology 6 A1N 1 C
    Period 2
    TFKE48 Biomolecular Disease Processes 6 A1F 2 C
    TFKE65 State of the Art in Molecular Life Science 6* A1N 4 C
    *The course is divided into several semesters and/or periods
    TFKE67 Biostructural Technologies 6 A1N 1 C

    Semester 2 Spring 2027

    Specialisation: External — Preliminary courses
    Course code Course name Credits Level Timetable module ECV
    Period 1
    NKED28 Protein Chemistry 12 A1N 1/2/3 C
    TFKE66 Structure Based Protein Targeting and Engineering, Project Course 6* A1F 4 C
    *The course is divided into several semesters and/or periods
    Period 2
    NKED20 Drug Discovery and Pharmaceutical Development 6 A1N 2 C
    TFKE66 Structure Based Protein Targeting and Engineering, Project Course 6* A1F 4 C
    *The course is divided into several semesters and/or periods
    TFKE73 Therapeutic Proteins 6 A1N 1 C
    Specialisation: Internal — Preliminary courses
    Course code Course name Credits Level Timetable module ECV
    Period 1
    NVFA10 Pharmacology 6 G2F 1/3 C
    TBMT38 Systems biology 6 G2F 2 C
    TFKE66 Structure Based Protein Targeting and Engineering, Project Course 6* A1F 4 C
    *The course is divided into several semesters and/or periods
    Period 2
    NKED20 Drug Discovery and Pharmaceutical Development 6 A1N 2 C
    TFKE66 Structure Based Protein Targeting and Engineering, Project Course 6* A1F 4 C
    *The course is divided into several semesters and/or periods
    TFKE73 Therapeutic Proteins 6 A1N 1 C

    Semester 3 Autumn 2027

    Specialisation: External — Preliminary courses
    Course code Course name Credits Level Timetable module ECV
    Period 1
    TFKE57 Proteomics 6 A1N 3 C
    TFKE75 Project course in Molecular Biology Techniques 6* G2F 2 C
    *The course is divided into several semesters and/or periods
    TVMB26 Molecular Virology 6 A1N 1 C
    Period 2
    TFKE48 Biomolecular Disease Processes 6 A1F 2 C
    TFKE67 Biostructural Technologies 6 A1N 1 C
    TFKE75 Project course in Molecular Biology Techniques 6* G2F 3 C
    *The course is divided into several semesters and/or periods
    Specialisation: Internal — Preliminary courses
    Course code Course name Credits Level Timetable module ECV
    Period 1
    TQXX60 Degree project - Master’s Thesis 60* A2E - C/E
    *The course is divided into several semesters and/or periods
    Period 2
    TQXX40 Degree project - Master’s Thesis 45* A2E - C/E
    *The course is divided into several semesters and/or periods
    TQXX60 Degree project - Master’s Thesis 60* A2E - C/E
    *The course is divided into several semesters and/or periods

    Semester 4 Spring 2028

    Specialisation: External — Preliminary courses
    Course code Course name Credits Level Timetable module ECV
    Period 1
    TQXX30 Degree project - Master’s Thesis 30* A2E - C
    *The course is divided into several semesters and/or periods
    Period 2
    TQXX30 Degree project - Master’s Thesis 30* A2E - C
    *The course is divided into several semesters and/or periods
    Specialisation: Internal — Preliminary courses
    Course code Course name Credits Level Timetable module ECV
    Period 1
    TQXX30 Degree project - Master’s Thesis 30* A2E - C/E
    *The course is divided into several semesters and/or periods
    TQXX40 Degree project - Master’s Thesis 45* A2E - C/E
    *The course is divided into several semesters and/or periods
    TQXX60 Degree project - Master’s Thesis 60* A2E - C/E
    *The course is divided into several semesters and/or periods
    Period 2
    TQXX40 Degree project - Master’s Thesis 45* A2E - C/E
    *The course is divided into several semesters and/or periods
    TQXX60 Degree project - Master’s Thesis 60* A2E - C/E
    *The course is divided into several semesters and/or periods

    Course syllabus

    A syllabus must be established for each course. The syllabus specifies the aim and contents of the course, and the prior knowledge that a student must have in order to be able to benefit from the course.

    Timetabling

    Program courses are timetabled after a decision has been made for this course concerning its assignment to a timetable module. Single subject courses can be timetabled at other times.

    Interruption in and deregistration from a course

    The LiU decision, Guidelines concerning confirmation of participation in education, Dnr LiU-2020-02256 (https://styrdokument.liu.se/Regelsamling/VisaBeslut/764582), states that interruptions in study are to be recorded in Ladok. Thus, all students who do not participate in a course for which they have registered are therefore obliged to report the interruption so that this can be noted in Ladok. Deregistration from or interrupting a course is carried out using a Web-based form.

    Cancelled courses and changes to the course syllabus

    Courses with few participants (fewer than 10) may be cancelled or organised in a manner that differs from that stated in the course syllabus. The Dean is to deliberate and decide whether a course is to be cancelled or changed from the course syllabus. For single subject courses, the cancellation must be done before students are admitted to the course (in accordance with LiUs regulation Dnr LiU-2022-01200, https://styrdokument.liu.se/Regelsamling/VisaBeslut/622645).

    Guidelines relating to examinations and examiners 

    For details, see Guidelines for education and examination for first-cycle and second-cycle education at Linköping University, Dnr LiU-2023-00379  (http://styrdokument.liu.se/Regelsamling/VisaBeslut/917592).

    An examiner must be employed as a teacher at LiU according to the LiU Regulations for Appointments, Dnr LiU-2022-04445 (https://styrdokument.liu.se/Regelsamling/VisaBeslut/622784). For courses in second-cycle, the following teachers can be appointed as examiner: Professor (including Adjunct and Visiting Professor), Associate Professor (including Adjunct), Senior Lecturer (including Adjunct and Visiting Senior Lecturer), Research Fellow, or Postdoc. For courses in first-cycle, Assistant Lecturer (including Adjunct and Visiting Assistant Lecturer) can also be appointed as examiner in addition to those listed for second-cycle courses. In exceptional cases, a Part-time Lecturer can also be appointed as an examiner at both first- and second cycle, see Delegation of authority for the Board of Faculty of Science and Engineering.

    Forms of examination

    Principles for examination

    Written and oral examinations and digital and computer-based examinations are held at least three times a year: once immediately after the end of the course, once in August, and once (usually) in one of the re-examination periods. Examinations held at other times are to follow a decision of the faculty programme board.

    Principles for examination scheduling for courses that follow the study periods:

    • courses given in VT1 are examined for the first time in March, with re-examination in June and August
    • courses given in VT2 are examined for the first time in May, with re-examination in August and January
    • courses given in HT1 are examined for the first time in October, with re-examination in January and August
    • courses given in HT2 are examined for the first time in January, with re-examination in March and in August.

    The examination schedule is based on the structure of timetable modules, but there may be deviations from this, mainly in the case of courses that are studied and examined for several programmes and in lower grades (i.e. 1 and 2). 

    Examinations for courses that the faculty programme board has decided are to be held in alternate years are held three times during the school year in which the course is given according to the principles stated above.

    Examinations for courses that are cancelled or rescheduled such that they are not given in one or several years are held three times during the year that immediately follows the course, with examination scheduling that corresponds to the scheduling that was in force before the course was cancelled or rescheduled.

    When a course, or a written or oral examination (TEN, DIT, DAT, MUN), is given for the last time, the regular examination and two re-examinations will be offered. Thereafter, examinations are phased out by offering three examinations during the following academic year at the same times as the examinations in any substitute course. The exception is courses given in the period HT1, where the three examination occasions are January, March and August. If there is no substitute course, three examinations will be offered during re-examination periods during the following academic year. Other examination times are decided by the faculty programme board. In all cases above, the examination is also offered one more time during the academic year after the following, unless the faculty programme board decides otherwise. In total, 6 re-examinations are offered, of which 2 are regular re-examinations. In the examination registration system, the examinations given for the penultimate time and the last time are denoted. 

    If a course is given during several periods of the year (for programmes, or on different occasions for different programmes) the faculty programme board or boards determine together the scheduling and frequency of re-examination occasions.

    For single subject courses, written and oral examinations can be held at other times.  

    Retakes of other forms of examination

    Regulations concerning retakes of other forms of examination than written examinations and digital and computer-based examinations are given in the LiU guidelines for examinations and examiners, Dnr LiU-2023-00379 (http://styrdokument.liu.se/Regelsamling/VisaBeslut/917592).

    In principle, other examination forms should be handled in the same way as a written examination when they are given for the last time. However, the times for the examination may vary based on the nature of the element compared to the times for the written examinations. 

    Course closure

    For Decision on Routines for Administration of the Discontinuation of Educational Programs, Freestanding Courses and Courses in Programs, see Dnr LiU-2021-04782 (https://styrdokument.liu.se/Regelsamling/VisaBeslut/1156410). After a decision on closure and after the end of the discontinuation period, the students are referred to a replacement course (or similar) according to information in the course syllabus or programme syllabus. If a student has passed some part/parts of a closed program course but not all, and there is an at least partially replacing course, an assessment of crediting can be made. For questions about the crediting of course components, contact the Study councellors.

    Registration for examination

    In order to take an written, digital or computer-based examination, registration in advance is mandatory, see decision in the university’s rule book Dnr LiU-2020-04559 (https://styrdokument.liu.se/Regelsamling/VisaBeslut/622682). An unregistered student can thus not be offered a place. The registration is done by the student at the Student Portal or in the LiU-app during the registration period. The registration period opens 30 days before the date of the examination and closes 10 days before the date of the examination. Candidates are informed of the location of the examination by email, four days in advance. 

    Code of conduct for students during examinations

    Details are given in a decision in the university’s rule book, Dnr LiU-2020-04559 (http://styrdokument.liu.se/Regelsamling/VisaBeslut/622682).

    Retakes for higher grade

    Students at the Faculty of Science and Engineering at LiU have the right to retake written examinations and digital and computer-based examinations in an attempt to achieve a higher grade. This is valid for all examination components with code “TEN”, “DIT” and "DAT". The same right may not be exercised for other examination components, unless otherwise specified in the course syllabus.

    A retake is not possible on courses that are included in an issued degree diploma. 

    Grades

    The grades that are preferably to be used are Fail (U), Pass (3), Pass not without distinction (4) and Pass with distinction (5). 

    • Grades U, 3, 4, 5 are to be awarded for courses that have written or digital examinations.
    • Grades Fail (U) and Pass (G) may be awarded for courses with a large degree of practical components such as laboratory work, project work and group work.
    • Grades Fail (U) and Pass (G) are to be used for degree projects and other independent work.

    Examination components

    The following examination components and associated module codes are used at the Faculty of Science and Engineering:

    • Grades U, 3, 4, 5 are to be awarded for written examinations (TEN) and digital examinations (DIT).
    • Examination components for which the grades Fail (U) and Pass (G) may be awarded are laboratory work (LAB), project work (PRA), preparatory written examination (KTR), digital preparatory written examination (DIK), oral examination (MUN), computer-based examination  in a computer lab (DAT), digital preparatory written examination in a computer lab (DAK), home assignment (HEM), and assignment (UPG).
    • Students receive grades either Fail (U) or Pass (G) for other examination components in which the examination criteria are satisfied principally through active attendance such as tutorial group (BAS) or examination item (MOM).
    • Grades Fail (U) and Pass (G) are to be used for the examination components Opposition (OPPO) and Attendance at thesis presentation (AUSK) (i.e. part of the degree project).

    In general, the following applies:

    • Mandatory course components must be scored and given a module code.
    • Examination components that are not scored, cannot be mandatory. Hence, it is voluntary to participate in these examinations, and the voluntariness must be clearly stated. Additionally, if there are any associated conditions to the examination component, these must be clearly stated as well.
    • For courses with more than one examination component with grades U,3,4,5, it shall be clearly stated how the final grade is weighted.

    For mandatory components, the following applies (in accordance with the LiU Guidelines for education and examination for first-cycle and second-cycle education at Linköping University, Dnr LiU-2023-00379 http://styrdokument.liu.se/Regelsamling/VisaBeslut/917592): 

    • If special circumstances prevail, and if it is possible with consideration of the nature of the compulsory component, the examiner may decide to replace the compulsory component with another equivalent component.

    For possibilities to alternative forms of examinations, the following applies (in accordance with the LiU Guidelines for education and examination for first-cycle and second-cycle education at Linköping University, Dnr LiU-2023-00379 http://styrdokument.liu.se/Regelsamling/VisaBeslut/917592): 

    • If the LiU coordinator for students with disabilities has granted a student the right to an adapted examination for a written examination in an examination hall, the student has the right to it.
    • If the coordinator has recommended for the student an adapted examination or alternative form of examination, the examiner may grant this if the examiner assesses that it is possible, based on consideration of the course objectives.
    • An examiner may also decide that an adapted examination or alternative form of examination if the examiner assessed that special circumstances prevail, and the examiner assesses that it is possible while maintaing the objectives of the course.

    Reporting of examination results

    The examination results for a student are reported at the relevant department.

    Plagiarism

    For examinations that involve the writing of reports, in cases in which it can be assumed that the student has had access to other sources (such as during project work, writing essays, etc.), the material submitted must be prepared in accordance with principles for acceptable practice when referring to sources when the text, images, ideas, data, etc. of other people are used. This is done by using references or quotations for which the source is specified. It is also to be made clear whether the author has reused his or her own text, images, ideas, data, etc. from previous examinations, such as degree projects, project reports, etc. (this is sometimes known as “self-plagiarism”).

    A failure to specify such sources may be regarded as attempted deception during examination.

    Attempts to cheat

    In the event of a suspected attempt by a student to cheat during an examination, or when study performance is to be assessed as specified in Chapter 10 of the Higher Education Ordinance, the examiner is to report this to the disciplinary board of the university. Possible consequences for the student are suspension from study and a formal warning. More information is available at Cheating, deception and plagiarism.

    Linköping University has also produced a guide for teachers and students' use of generative AI in education (Dnr LiU-2023-02660). As a student, you are always expected to gain knowledge of what applies to each course (including the degree project). In general, clarity to where and how generative AI has been used is important.  

    Regulations (apply to LiU in its entirety)

    The university is a government agency whose operations are regulated by legislation and ordinances, which include the Higher Education Act and the Higher Education Ordinance. In addition to legislation and ordinances, operations are subject to several policy documents. The Linköping University rule book collects currently valid decisions of a regulatory nature taken by the university board, the vice-chancellor and faculty/department boards.

    LiU’s rule book for education at first-cycle and second-cycle levels is available at https://styrdokument.liu.se/Regelsamling/Innehall